I was thinking about this today, and i realized, "who will play this, when they could just DL Shiny gold" So yea, i fell as if im just copying SG, so i decided to change this hack Completely around heres the new story:
You begin in Novel City, in the region of Kionn, Your father is the Prof., He tells you that today 25 years ago he began his Pokemon Journey, and he wants you to begin yours today as well, he lets you choose from 3 pokemon he recently had shipped from the Johto especially for this day, which are Totodile, Cyndaquil, Chikarita. Your father is highly respected among Kionn, So you get Special Treatment from others, after you receive your pokemon you head towards Route 1 when you encounter a challenge from a beginning trainer, not much older than yourself(your rival), He challenges you to a battle, later on you'll have to face him again, but his not your only rival, you'll encounter with another, a few cities later, once you reach the next town which is Steel City, You hear an Evil Team Known as Team Carnage Plotting to capture the sacred Pokemon(im not going to tell you what the pokemon is)
^Thats What i got right now, I have more ideas, continue to check the thread as i think of some more things to add to give the story a bit of a twist.^